@@ -31,40 +31,8 @@ https://omero-guides.readthedocs.io/en/latest/iviewer/docs/index.html
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Settings
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========
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- OMERO limits the size of Z-projections to reduce load on the server.
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- The limit is defined as the number of bytes of raw pixel data in a Z-stack and
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- the OMERO.server default is equivalent to 1024 * 1024 * 256 bytes.
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- For example, a single-channel 8-bit image (1 byte per pixel) of XYZ size
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- 1024 * 1024 * 256 is equal to the default threshold.
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-
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- To double the limit, use::
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-
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- $ omero config set omero.pixeldata.max_projection_bytes 536870912
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-
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- If you wish to set a threshold for iviewer that is *lower * than for the server:
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-
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- $ omero config set omero.web.iviewer.max_projection_bytes 268435456
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-
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- NB: Z-projection is not supported for tiled images in OMERO
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- (Images larger than 2048 * 2048 pixels per plane are tiled in iviewer).
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-
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- OMERO uses Spectrum Color Picker for selecting ROI colors.
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- The roi_color_palette option allows you to specify a grid of colors for users to choose for ROIs.
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- Define rows with brackets, and use commas to separate values. By default, only the first color of each row is shown.
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- A full grid is shown when the default color picker is hidden (see below)
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- To define a color palette use::
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-
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- $ omero config set omero.web.iviewer.roi_color_palette "[rgb(0,255,0)],[darkred,red,pink],[#0000FF]"
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-
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- To hide the default color picker (and show a grid for the color palette), set show_palette_only to true
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- You must define a palette and each row can display 4 colors::
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-
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- $ omero config set omero.web.iviewer.show_palette_only true
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-
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- When working with other images (coregistering MRIs for example), it is necessary to be able to mirror an image.
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- There is now experimental support for runtime image mirroring. To enable mirroring set enable_mirror to true.
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-
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- $ omero config set omero.web.iviewer.enable_mirror true
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+ See the `OMERO.iviewer settings <https://github.com/ome/omero-iviewer/blob/settings_docs/docs/settings.md >`_
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+ for details on how to configure various settings.
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Known issues
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============
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