Popular repositories Loading

1. taxtriage taxtriage Public

   TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomic NGS data. This flexible tool was developed with various us…

   Python 37 5

2. Basestack Basestack Public

   Basestack is a platform for rapid and real time analysis of NGS data. It provides a executable application that connects standard bionformatics tools to a user interface. It is usable on all major …

   JavaScript 26 1

3. mytax mytax Public

   mytax is a tool for building custom taxonomies, useful for nucleotide sequence classification

   JavaScript 11 2

4. DeepPaint DeepPaint Public

   A python package for exploration and classification of Cell Painting data.

   Jupyter Notebook 3

5. basestack_consensus basestack_consensus Public

   This repository is a Dockerized pipeline for creating consensus viral genomes from Oxford Nanopore data. This pipeline leverages the ARTIC Network bioinformatics pipeline and couples many annotatio…

   Shell 2 2

6. AGAVE AGAVE Public

   Automated Genomics Application for Variant Exploration (AGAVE)

   Vue 2