Popular repositories Loading

1. deeplift deeplift Public

   Public facing deeplift repo

   Python 859 168

2. dragonn dragonn Public

   A toolkit to learn how to model and interpret regulatory sequence data using deep learning.

   Jupyter Notebook 261 71

3. atac_dnase_pipelines atac_dnase_pipelines Public

   ATAC-seq and DNase-seq processing pipeline

   Python 166 78

4. chrombpnet chrombpnet Public

   Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)

   Jupyter Notebook 163 44

5. bpnet bpnet Public

   Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them

   Jupyter Notebook 156 34

6. tfmodisco tfmodisco Public

   TF MOtif Discovery from Importance SCOres

   Jupyter Notebook 142 29