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  1. GeneExpressionAnalysis GeneExpressionAnalysis Public

    A tutorial demonstrating how to analyze gene expression data using elastic net models to predict patient responses to immunotherapy, focusing on regularization, cross-validation, and feature import…

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    A C++-programmed version of the game, Yacht!

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  3. CAMISIM_Preparation_Pipeline CAMISIM_Preparation_Pipeline Public

    A step-by-step guide on how to generate the required files needed for CAMISIM to run for de novo community design and read simulation. Definitely a work in progress.

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  4. FDR-Hedenfalk-Microarray FDR-Hedenfalk-Microarray Public

    Reproducing key findings from Storey and Tibshirani (2003) using preprocessed microarray data to analyze differentially expressed genes (DEGs). Leveraging R and statistical packages to explore the …

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  5. DNA-Microarray-Limma DNA-Microarray-Limma Public

    This project involves analyzing DNA microarray data using Bioconductor and R to identify differentially expressed genes in mutant versus wild-type zebrafish. It leverages statistical techniques, in…

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  6. RNA-Seq-Analysis RNA-Seq-Analysis Public

    This project provides a reproducible workflow for bulk RNA-Seq data analysis, including preprocessing, quality control, differential expression analysis, and visualization using edgeR and limma-voo…

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