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1. tksm tksm Public

   Very modular, very cool long-read transcriptomic simulator

   C++ 5 1

2. freddie freddie Public

   Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing

   Python 16 3

3. genion genion Public

   GENe fusION

   C++ 8 1

4. scTagger scTagger Public

   10x single cell short- and long-read RNA sequencing

   Python 11

5. circminer circminer Public

   A sensitive and fast tool for circular RNA detection from RNA-Seq data

   C++ 10 4

6. calib calib Public

   Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.

   HTML 38 10